Publications

Publications

  • J. Fehrenbach, L.Weynans  Source and metric estimation in the eikonal equation using optimization on a manifold Inverse Problems and Imaging, vol. 17 (2023) Link
  • P. Cordelier, M. Costa, J. Fehrenbach Slow-fast model and therapy optimization for oncolytic treatment of tumors Bull. Math. Biol., vol 84 (2022) Link
  • L. Guillaume, L. Rigal, J. Fehrenbach, C. Severac, B. Ducommun, V. Lobjois Characterization of the physical properties of tumor-derived spheroids reveals critical insights for pre-clinical studies Sc. Reports, vol. 9 (2019) Link
  • T. Michel, J. Fehrenbach, V. Lobjois, J. Laurent, T. Colin, C. Poignard Mathematical modeling of the proliferation gradient in multicellular tumor spheroids J. Th. Biol., vol. 458 (2018), pp. 133 – 147 Link
  • V. Debarnot, J. Fehrenbach, F. de Gournay, L. Martire The Case of Neumann, Robin, and Periodic Lateral Conditions for the Semi-infinite Generalized Graetz Problem and Applications SIAM J. Applied Mathematics, vol 78 (2018), pp.2227 – 2251 Link
  • I. David, P. Kohnke, J. Fehrenbach, A. Lopes Simoes, E. Debreuve, et al. New objective measurements of semen wave motion are associated with fertility in sheep Reproduction, Fertility and Development, vol. 30 (2018), pp. 889-896. Link
  • G. Dechristé, J. Fehrenbach, E. Griseti, V. Lobjois, C. Poignard Viscoelastic modeling of the fusion of multicellular tumor spheroids in growth phase, J. Th. Biol. vol. 454 (2018), pp. 102-109 Link
  • Th. Colin, G. Dechristé, J. Fehrenbach, L. Guillaume, V Lobjois, C. Poignard Experimental estimation of stored stress within spherical microtissues- What can and cannot be inferred from cutting experiments, J. Math. Biol., vol. 77 (2018) pp.1073 – 1092 link
  • J. Fehrenbach, F. de Gournay Shape optimization via a levelset and a Gauss-Newton method , ESAIM: COCV, vol. 25 (2019) Link
  • A. Gomes, L. Guillaume, D. Grimes, J. Fehrenbach, V. Lobjois, B. Ducommun Oxygen Partial Pressure Is a Rate-Limiting Parameter for Cell Proliferation in 3D Spheroids Grown in Physioxic Culture Condition, PLoS ONE 11 (2016)
  • W. Zhang, J. Fehrenbach, A. Desmaison, P. Weiss, V. Lobjois, B. Ducommun Structure tensor based analysis of cells and nuclei organization in tissues, IEEE Trans. Med. Imag., vol. 35 (2016), pp. 294-306
  • S. Amstutz, J. Fehrenbach, Edge detection using topological gradients: a scale-space approach, J. Math. Imag. Vis., vol. 52 (2015), pp. 249-266 Link
  • J. Fehrenbach, J. Narski, J. Hua, S. Lemercier, A. Jelic, C. Appert-Rolland, S. Donikian, J. Pettré, P. Degond, Time-delayed Follow-the-Leader model for pedestrians walking in line, Networks and Heterogeneous Media, vol. 10 (2015), pp. 579-608
  • J. Fehrenbach, P. Weiss Processing stationary noise: model and parameter selection in variational methods, SIAM J. Imaging Sci., vol. 7 (2014), pp 613-640 Link
  • J. Fehrenbach, F. de Gournay Shape optimization for the generalized Graetz problem, Struct. Multidiscip. O., vol. 49 (2014), pp. 993-1008 Link
  • J. Fehrenbach, J.-M. Mirebeau, Sparse non-negative stencils for anisotropic diffusion, J. Math. Imag. Vis., vol. 49 (2013), pp. 123-147 Link
  • S. Larnier, J. Fehrenbach, M. Masmoudi, The Topological Gradient Method: From Optimal Design to Image Processing, Milan J. Math., vol 80 (2012), pp. 411-441 Link
  • J. Fehrenbach, P. Weiss, C. Lorenzo Variational Algorithms to Remove Stationary Noise: Applications to Microscopy Imaging, IEEE Trans. Image Proc., vol. 21 (2012), pp. 4420-4430 Link
  • M. Moussaïd, E. Guillot, M. Moreau, J. Fehrenbach, O. Chabiron, S. Lemercier, J. Pettré, C. Appert-Rolland, P. Degond, G. Theraulaz, Traffic Instabilities in Self-organized Pedestrian Crowds, PLoS Computational Biology, 8 (2012), e1002442 (open access). Link
  • J. Fehrenbach, F. de Gournay, C. Pierre, F. Plouraboué The generalized Graetz problem in finite domains, SIAM J. of Applied Mathematics, vol 72 (2012), pp. 99-123 Link
  • C. Lorenzo, C. Frongia, R. Jorand, J. Fehrenbach, P. Weiss, A. Maandhui, G. Gay, B. Ducommun and V. Lobjois Live cell division dynamics monitoring in 3D large spheroid tumor models using light sheet microscopy, Cell Division 2011, 6:22. Link
  • S. Lemercier, A. Jelic, J. Hua, J. Fehrenbach, P. Degond, C. Appert-Rolland, S. Donikian, J. Pettré Un modèle de suivi réaliste pour la simulation de foules, Revue Electronique Francophone d’Informatique Graphique, vol 5 (2011), pp. 67-76 Link
  • D. Auroux, J. Fehrenbach Identification of velocity fields for geophysical fluids from a sequence of images, Experiments in Fluids, vol 50/2 (2011), pp. 313- Link
  • J. Fehrenbach, J. Oudry, L. Sandrin Variational data assimilation to estimate the velocity in the wave equation, Inverse Problems, vol 26 (2010), 115005 Link
  • S. Bargiacchi-Soula, J. Fehrenbach, M. Masmoudi, From linear to nonlinear large scale systems, SIAM J. Matrix Analysis, vol 31/4 (2010), pp. 1552-1569 Link
  • J. Fehrenbach, M. Masmoudi, D. Melodelima, Low dimensional optimization for in vivo real-time porcine liver motion estimation using ultrasound imaging, Ultrasonics, vol 50/1 (2010), pp. 44-51 Link
  • Y. Capdeboscq, J. Fehrenbach, F. de Gournay, O. Kavian, Imaging by modification: numerical reconstruction of local conductivities from corresponding power density measurements, SIAM J. Imaging Science, vol 2/4 (2009), pp. 1003-1030 Link
  • J. Fehrenbach, M. Masmoudi A fast algorithm for image registration, Comptes Rendus Mathématique, vol 346/9-10 (2008), pp. 593-598 Link
  • J. Fehrenbach, M. Hassine, L. Siala Robust estimation of the normal to a curve using optimal control, Optimal Control Applications and Methods, vol 29/4 (2008), pp. 279-294 Link
  • J. Fehrenbach Influence of Poisson’s ratio on elastographic direct and inverse problems, Phys. Med. Biol., vol 52 (2007), pp. 707-716 Link
  • J. Fehrenbach, M. Masmoudi, R. Souchon, P. Trompette Detection of small inclusions using elastography, Inverse Problems, vol 22 (2006), pp. 1055-1069 Link
  • J. Fehrenbach, M. Masmoudi An introduction to the topological asymptotic expansion with examples Revue Africaine de la Recherche en Informatique et Mathématiques Appliquées, INRIA, vol 5 (2006), pp. 230-255. HAL Link
  • J. Fehrenbach, J. Los Une minoration de l’entropie topologique des diffeomorphismes du disque, J. London Math. Soc. (2) vol 60 (1999), pp. 921-924 Link

Contribution to a collective work

  • X. Buff, J. Fehrenbach, P. Lochak, L. Schneps, P. Vogel Espaces de modules des courbes, groupes modulaires et théorie des champs , Panoramas et Synthèses 7 (1999), SMF ed.

Conference proceedings

  • J. Fehrenbach, M. Nikolova, G. Steidl, P. Weiss Bilevel image denoising using gaussianity tests Scale Space and Variational Methods in Computer Vision 2015
  • B. Papiez, M. Heinrich, J. Fehrenbach, L. Risser, J. Schnabel An implicit sliding-motion preserving regularisation via bilateral filtering for deformable image registration, Medical image analysis, 18(8), 1299-1311 (2014).
  • C. Appert-Rolland, A. Jelic, P. Degond, J. Fehrenbach, J. Hua, A. Crétual, J. Pettré Experimental study of the following dynamics of pedestrians In Pedestrian and Evacuation Dynamics 2012 (pp. 305-315). Springer International Publishing (2014).
  • Y. Hu, M. Jung, A. Oukili, G. Yang, J.C. Nunes, J. Fehrenbach, L. Cohen Sparse reconstruction from a limited projection number of the coronary artery tree in X-ray rotational imaging ISBI 2012
  • S. Lemercier, A. Jelic, R. Kulpa, J. Hua, J. Fehrenbach, P. Degond, C. Appert-Rolland, S. Donikian, J. Pettré, Realistic following behaviors for crowd simulation, EUROGRAPHICS 2012
  • J. Fehrenbach, P. Weiss and C. Lorenzo, Variational algorithms to remove stripes: a generalization of the negative norm models, ICPRAM (2012)
  • O. Chabiron, J. Fehrenbach, P. Degond, M Moussaïd, J. Pettré, S. Lemercier Lane detection in pedestrian motion and entropy-based order index, ICPRAM 2012
  • S. Larnier, J. Fehrenbach Edge detection and image restoration with anisotropic topological gradient, ICASSP 2010
  • J. Fehrenbach, M. Masmoudi, R. Souchon, P. Trompette Relative Young’s modulus identification using elastography , Revue Européenne de Mécanique Numérique, vol 15, no 1-2-3 (2006), 167–174.
  • J. Fehrenbach, M. Masmoudi Coupling topological gradient and Gauss-Newton methods , IUTAM Symposium on Topological Design Optimization, Bendsoe-Olhoff-Sigmund editors (Springer, 2006)
  • J. Fehrenbach, M. Masmoudi An introduction to the topological asymtotic expansion with examples , ARIMA, 5 (2006), 230–255