{"id":64,"date":"2010-11-01T00:00:12","date_gmt":"2010-11-01T00:00:12","guid":{"rendered":"http:\/\/pageperso.math.univ-toulouse.fr\/mixomics\/?p=64"},"modified":"2013-10-22T15:05:37","modified_gmt":"2013-10-22T15:05:37","slug":"new-function-plot-valid","status":"publish","type":"post","link":"https:\/\/perso.math.univ-toulouse.fr\/mixomics\/2010\/11\/01\/new-function-plot-valid\/","title":{"rendered":"New function: plot.valid"},"content":{"rendered":"<ul>\n<li>New function\u00a0<code>plot.valid<\/code> to display the results of the\u00a0<code>valid<\/code> function<\/li>\n<li>New code for\u00a0<code>imgCor<\/code> function for a nicer representation of the correlation matrices<\/li>\n<li>In\u00a0<code>predict<\/code> function the argument\u00a0<code>'method'<\/code> were replaced by\u00a0<code>method = c(\"max.dist\", \"class.dist\", \"centroids.dist\", \"mahalanobis.dist\")<\/code><\/li>\n<li>The arguments\u00a0<code>dendrogram<\/code>,\u00a0<code>ColSideColors<\/code> and\u00a0<code>RowSideColors<\/code> were added to the\u00a0<code>cim<\/code> function<\/li>\n<li><code>valid<\/code> function can also been performed with missing values<\/li>\n<li>Functions\u00a0<code>pls<\/code>,\u00a0<code>plsda<\/code>,\u00a0<code>spls<\/code> and\u00a0<code>splsda<\/code> were modified to identify zero- or near-zero variance predictors<\/li>\n<li>The functions\u00a0<code>plotVar<\/code> and\u00a0<code>plot3dVar<\/code> were modified to represent only the\u00a0X\u00a0variables in the case of PLS-DA and SPLS-DA<\/li>\n<li>The\u00a0<code>pca<\/code> function has been improved so that the S3 methods\u00a0<code>plotIndiv<\/code>,\u00a0<code>plot3dIndiv<\/code>,\u00a0<code>plotVar<\/code>and\u00a0<code>plot3dVar<\/code> can be used with these new classe<\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>New function\u00a0plot.valid to display the results of the\u00a0valid function New code for\u00a0imgCor function for a nicer representation of the correlation matrices In\u00a0predict function the argument\u00a0&#8216;method&#8217; were replaced by\u00a0method = c(&#8220;max.dist&#8221;, &#8220;class.dist&#8221;, &#8220;centroids.dist&#8221;, &#8220;mahalanobis.dist&#8221;) The arguments\u00a0dendrogram,\u00a0ColSideColors and\u00a0RowSideColors were added to the\u00a0cim function valid function can also been performed with missing values Functions\u00a0pls,\u00a0plsda,\u00a0spls and\u00a0splsda were modified to [&hellip;]<\/p>\n","protected":false},"author":44,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[9,1,3,4,6,5],"tags":[],"class_list":["post-64","post","type-post","status-publish","format-standard","hentry","category-case-studies","category-graphics","category-methods-2","category-news","category-publications","category-research"],"_links":{"self":[{"href":"https:\/\/perso.math.univ-toulouse.fr\/mixomics\/wp-json\/wp\/v2\/posts\/64","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/perso.math.univ-toulouse.fr\/mixomics\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/perso.math.univ-toulouse.fr\/mixomics\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/perso.math.univ-toulouse.fr\/mixomics\/wp-json\/wp\/v2\/users\/44"}],"replies":[{"embeddable":true,"href":"https:\/\/perso.math.univ-toulouse.fr\/mixomics\/wp-json\/wp\/v2\/comments?post=64"}],"version-history":[{"count":3,"href":"https:\/\/perso.math.univ-toulouse.fr\/mixomics\/wp-json\/wp\/v2\/posts\/64\/revisions"}],"predecessor-version":[{"id":1023,"href":"https:\/\/perso.math.univ-toulouse.fr\/mixomics\/wp-json\/wp\/v2\/posts\/64\/revisions\/1023"}],"wp:attachment":[{"href":"https:\/\/perso.math.univ-toulouse.fr\/mixomics\/wp-json\/wp\/v2\/media?parent=64"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/perso.math.univ-toulouse.fr\/mixomics\/wp-json\/wp\/v2\/categories?post=64"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/perso.math.univ-toulouse.fr\/mixomics\/wp-json\/wp\/v2\/tags?post=64"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}