Category Archives: News

mixomics.org

Posted on 15 April 2015 by sdejean

The web site has moved to www.mixomics.org.

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New publication with multiple integration

Posted on 12 November 2014 by Kim-Anh Lê Cao

Our paper ‘Novel Multivariate Methods for Integration of Genomics and Proteomics Data: Applications in a Kidney Transplant Rejection Study‘ has just been accepted in OMICS: a journal of integrative Biology, from a collaboration with scientists from the PRevention Of Organ Failure … Continue reading →

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Toulouse tutorial, 6-7 October 2014

Posted on 3 October 2014 by Kim-Anh Lê Cao

We are running our second tutorial in Toulouse, hosted by the National Institute for Agricultural Research (INRA) and organised by the Plate-forme bio-informatique GenoToul. You can download the following files  mixOmics-material,  R scripts to run the command lines and presentation … Continue reading →

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Toulouse tutorial 6-7 Oct 2014 – Registration

Posted on 17 September 2014 by sdejean

Training fees For INRA staff: this training session is not supported by INRA professional training, therefore, you do not have to provide an individual request training. An attendance certificate will be delivered at the end of the training session. For non-INRA … Continue reading →

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Toulouse tutorial 6-7 Oct 2014: Details

Posted on 17 September 2014 by sdejean

Training aims The objective of this tutorial is to introduce the fundamental concepts behind projection-based approaches and illustrate their application on some exemplar studies using the R package mixOmics.  In this tutorial, we will focus on the application of these … Continue reading →

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ECCB’14 Tutorial Sept 7

Posted on 3 September 2014 by Kim-Anh Lê Cao

We ran our first mixOmics tutorial as part of the ECCB’14 conference in the beautiful city of Strasbourg. This one-day tutorial was a success and will be followed by other tutorials in 2014 and 2015. The tutorial material can be … Continue reading →

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perf() function tutorial

Posted on 21 August 2014 by Kim-Anh Lê Cao

The old function valid() has been superseded by the perf() function. The update of the website is on its way, in the meantime, please download the following file: Running_perf_function4.        

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mixOmics 5.0-2 update

Posted on 11 August 2014 by Kim-Anh Lê Cao

The major changes of this new update is the perf() function that supersedes valid() and offers a variable stability measure across the different folds. The pls() and spls() functions have been modified and are now following the same framework coding. … Continue reading →

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ECCB’14 Tutorial on mixOmics

Posted on 16 June 2014 by Kim-Anh Lê Cao

ECCB Tutorial T04. Multivariate methodologies for the exploration of large biological data sets. Application in R using the mixOmics package Date: Sunday Sept 7, 2014 Venue: FORUM building, Faculté de Médecine, 4, rue Kirschleger, Strasbourg Time: 9am – 5.30pm (registration starts … Continue reading →

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Version 4.1-3 is on CRAN now

Posted on 25 February 2013 by Kim-Anh Lê Cao

Changes in 4.1 ================ New features: ————- – New S3 method valid for objects of class psl, spls, plsda and splsda – New select.var function to directly extract the selected variables from spls, spca, sipca – New data set vac18 … Continue reading →

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